Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | AX777_04565 | P50513 | Negative | 1669985 - 1670935 | 34121.4 |
| peptidase | AX777_04570 | Not Available | Positive | 1670953 - 1671354 | 13576.3 |
| histidine phosphotransferase | AX777_04575 | Q2YQA5 | Positive | 1671446 - 1672099 | 22750.9 |
| hypothetical protein | AX777_04580 | Not Available | Negative | 1672112 - 1672621 | 18693.4 |
| 2-nitropropane dioxygenase | AX777_04585 | B2TEK6 | Negative | 1672618 - 1673676 | 35939.2 |
| dna-binding protein | AX777_04590 | Not Available | Negative | 1673711 - 1674013 | 10683.8 |
| glutamine synthetase | AX777_04595 | Q59747 | Negative | 1674134 - 1675546 | 52399.4 |
| transcriptional regulator | AX777_04600 | Q53044 | Negative | 1675641 - 1675979 | 12155.7 |
| methionine aminopeptidase | AX777_04605 | Q9ZCD3 | Negative | 1676316 - 1677176 | 31210.7 |
| aldehyde-activating protein | AX777_04610 | Not Available | Positive | 1677230 - 1677712 | 17021.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

