Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | AX777_04515 | P37787 | Positive | 1658989 - 1659960 | 35528.4 |
| hypothetical protein | AX777_04520 | Not Available | Negative | 1659942 - 1660571 | 22381.5 |
| atp-dependent clp protease proteolytic subunit | AX777_04525 | Q1GPH5 | Positive | 1660651 - 1661286 | 23312.2 |
| atp-dependent clp protease atp-binding subunit clpx | AX777_04530 | A5V3U4 | Positive | 1661420 - 1662688 | 45856.4 |
| tonb-dependent receptor | AX777_04535 | Not Available | Positive | 1663055 - 1665535 | 88075.7 |
| monofunctional biosynthetic peptidoglycan transglycosylase | AX777_04540 | Q9ABA6 | Negative | 1665748 - 1666461 | 25942.6 |
| mfs transporter | AX777_04545 | Not Available | Negative | 1666505 - 1667794 | 45724.1 |
| transcriptional regulator | AX777_04550 | Not Available | Positive | 1667906 - 1668454 | 19216.7 |
| gcn5 family acetyltransferase | AX777_04555 | Not Available | Positive | 1668451 - 1668936 | 17332.5 |
| rna polymerase subunit sigma-70 | AX777_04560 | P50512 | Negative | 1668992 - 1669906 | 34827.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

