Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosine deaminase | AX777_04265 | Q9A3M3 | Negative | 1607958 - 1608974 | 37702.6 |
| aldehyde dehydrogenase iron-sulfur subunit | AX777_04270 | Not Available | Positive | 1609275 - 1609910 | 22279.9 |
| molybdopterin dehydrogenase | AX777_04275 | P77324 | Positive | 1609907 - 1610857 | 33822.7 |
| xanthine dehydrogenase | AX777_04280 | Q8X6J4 | Positive | 1610862 - 1613063 | 77226.9 |
| isochorismatase | AX777_04285 | B9JLT8 | Positive | 1613084 - 1613683 | 21590.1 |
| abc transporter atp-binding protein | AX777_04290 | Q933I3 | Positive | 1613868 - 1615550 | 61045.6 |
| rnd transporter | AX777_04295 | Not Available | Positive | 1615547 - 1616617 | 38974.5 |
| multidrug transporter | AX777_04300 | Not Available | Positive | 1616620 - 1618083 | 52497.5 |
| hypothetical protein | AX777_04305 | Not Available | Negative | 1618108 - 1619295 | 43130.4 |
| transcription factor jumonji, jmjc | AX777_04310 | Not Available | Negative | 1619292 - 1620128 | 30623.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

