Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m28 | AX777_04165 | Not Available | Negative | 1585602 - 1587275 | 59247.7 |
| 30s ribosomal protein s4 | AX777_04170 | Q1GV16 | Negative | 1587438 - 1588052 | 23227.2 |
| chorismate mutase | AX777_04175 | Not Available | Positive | 1588297 - 1588593 | 11073.1 |
| rrna methyltransferase | AX777_04180 | A0A0H2ZF87 | Negative | 1588590 - 1589318 | 26420.8 |
| nrdr family transcriptional regulator | AX777_04185 | A5V5D2 | Negative | 1589742 - 1590203 | 17539.8 |
| serine hydroxymethyltransferase | AX777_04190 | Q1GV11 | Negative | 1590210 - 1591529 | 46268.1 |
| ribose-5-phosphate isomerase | AX777_04195 | P37351 | Negative | 1591541 - 1591978 | 15015.9 |
| hypothetical protein | AX777_04200 | Not Available | Positive | 1592081 - 1592266 | 6350.37 |
| heat-shock protein | AX777_04205 | O69241 | Negative | 1592331 - 1592792 | 17456.8 |
| abc transporter substrate-binding protein | AX777_04210 | P57062 | Positive | 1593417 - 1594667 | 44924.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

