Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | AX777_04115 | Q54YD9 | Negative | 1578994 - 1579503 | 18600.8 |
| uracil-dna glycosylase | AX777_04120 | Q5SJ65 | Positive | 1579527 - 1580192 | 24090.1 |
| hypothetical protein | AX777_04125 | B8EK66 | Negative | 1580189 - 1580515 | 11642.4 |
| n-carbamoylputrescine amidase | AX777_04130 | Q9XGI9 | Negative | 1580547 - 1581395 | 31878.8 |
| hypothetical protein | AX777_04135 | Not Available | Negative | 1581464 - 1581796 | 11115.8 |
| agmatine deiminase | AX777_04140 | A7FEY8 | Negative | 1581886 - 1582878 | 34891.1 |
| hypothetical protein | AX777_04145 | Not Available | Positive | 1582980 - 1583432 | 16818.1 |
| hypothetical protein | AX777_04150 | Not Available | Negative | 1583608 - 1583988 | 13824.4 |
| glutathionylspermidine synthase | AX777_04155 | P0ADT7 | Negative | 1584049 - 1585185 | 42592.2 |
| hypothetical protein | AX777_04160 | Not Available | Negative | 1585185 - 1585529 | 12022.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

