Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | AX777_23985 | P59078 | Positive | 151553 - 153121 | 58530.1 |
| luxr family transcriptional regulator | AX777_23990 | P0AFQ9 | Positive | 153126 - 153914 | 28938.2 |
| mbl fold metallo-hydrolase | AX777_23995 | Not Available | Positive | 153911 - 154699 | 28680.1 |
| aspartyl protease | AX777_24000 | Not Available | Positive | 154699 - 155358 | 23202.4 |
| alpha-ketoglutarate permease | AX777_24005 | Not Available | Positive | 155355 - 156659 | 46910.8 |
| hypothetical protein | AX777_24010 | Not Available | Negative | 156880 - 157350 | 17949.1 |
| integrase | AX777_24015 | Not Available | Negative | 157347 - 159476 | 80710.6 |
| integrase | AX777_24020 | Not Available | Negative | 159467 - 160633 | 44289.1 |
| abc transporter | AX777_24345 | P32015 | Positive | 161120 - 161923 | 29663.0 |
| lipopolysaccharide biosynthesis protein | AX777_24350 | Not Available | Positive | 161953 - 163119 | 42683.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

