Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | AX777_04015 | Not Available | Negative | 1548560 - 1551004 | 86507.5 |
| iron dicitrate transport regulator fecr | AX777_04020 | Not Available | Negative | 1550988 - 1551917 | 32744.6 |
| rna polymerase subunit sigma-70 | AX777_04025 | Not Available | Negative | 1551973 - 1552485 | 19313.3 |
| serine hydrolase | AX777_04030 | P9WLZ2 | Positive | 1552644 - 1553849 | 44152.9 |
| glycogen phosphorylase | AX777_04035 | P0AC86 | Positive | 1553969 - 1556434 | 92470.1 |
| glycogen-branching enzyme | AX777_04040 | Q985P4 | Positive | 1556474 - 1558648 | 81186.8 |
| glucose-1-phosphate adenylyltransferase | AX777_04045 | B5ZQ46 | Positive | 1558697 - 1559956 | 46475.5 |
| glycogen synthase | AX777_04050 | Q985P2 | Positive | 1559965 - 1561416 | 51406.8 |
| glycogen debranching enzyme | AX777_04055 | A8GKU9 | Positive | 1561413 - 1563317 | 69157.6 |
| thioesterase | AX777_04060 | Not Available | Positive | 1563414 - 1564046 | 22835.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

