Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell wall degradation protein | AX777_03965 | Not Available | Positive | 1536468 - 1537961 | 53872.4 |
| glutaredoxin | AX777_03970 | Not Available | Negative | 1537980 - 1538744 | 27867.0 |
| merr family transcriptional regulator | AX777_03975 | P0A183 | Positive | 1538812 - 1539219 | 14685.5 |
| transporter | AX777_03980 | Not Available | Negative | 1539201 - 1539365 | 6681.85 |
| crossover junction endodeoxyribonuclease ruva | AX777_03985 | A5V3V3 | Negative | 1539665 - 1540138 | 16880.3 |
| hypothetical protein | AX777_03990 | Not Available | Negative | 1540271 - 1541395 | 40390.4 |
| asparaginyl/glutamyl-trna amidotransferase subunit c | AX777_03995 | A5V3V1 | Positive | 1541567 - 1541854 | 10348.4 |
| aspartyl/glutamyl-trna amidotransferase subunit a | AX777_04000 | A5V3V0 | Positive | 1541978 - 1543462 | 51936.5 |
| glutamyl-trna amidotransferase | AX777_04005 | Q2G4F6 | Positive | 1543464 - 1544969 | 54977.1 |
| transporter | AX777_04010 | Not Available | Negative | 1545243 - 1548458 | 107004.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

