Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | AX777_03465 | Not Available | Positive | 1437722 - 1441135 | 124827.0 |
| chemotaxis protein cher | AX777_03470 | Not Available | Positive | 1441120 - 1441995 | 33218.4 |
| regulator | AX777_03475 | A6X554 | Positive | 1441985 - 1443802 | 65749.5 |
| Trna-pro | Not Available | Not Available | Positive | 1443975 - 1444051 | Not Available |
| dna repair protein radc | AX777_03485 | Not Available | Negative | 1444156 - 1444431 | 10286.4 |
| thymidylate synthase | AX777_03490 | Q1GTH6 | Positive | 1444636 - 1445571 | 35383.0 |
| 2-oxoisovalerate dehydrogenase | AX777_03495 | Q9I1M2 | Positive | 1445689 - 1446984 | 47418.8 |
| 2-oxoisovalerate dehydrogenase | AX777_03500 | Q9I1M1 | Positive | 1447038 - 1448042 | 36491.9 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | AX777_03505 | Q9I1M0 | Positive | 1448048 - 1449373 | 46964.4 |
| hypothetical protein | AX777_03510 | Not Available | Negative | 1449419 - 1449889 | 17108.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

