Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | AX777_10245 | Not Available | Negative | 1348803 - 1349237 | 16171.9 |
| 2'-5' rna ligase | AX777_10250 | Not Available | Positive | 1349357 - 1349908 | 20686.0 |
| phna protein | AX777_10255 | P0AFJ3 | Negative | 1349915 - 1350217 | 10773.7 |
| gtp-binding protein | AX777_10260 | Q1GN74 | Negative | 1350222 - 1350869 | 23535.4 |
| membrane protein insertase yidc | AX777_10265 | Q9RNL5 | Negative | 1350911 - 1352617 | 63132.9 |
| membrane protein insertion efficiency factor | AX777_10270 | Q1GN72 | Negative | 1352653 - 1352865 | 7747.64 |
| ribonuclease p protein component | AX777_10275 | Q2N7X0 | Negative | 1352862 - 1353263 | 14489.0 |
| disulfide bond formation protein dsba | AX777_10280 | Not Available | Negative | 1353601 - 1354311 | 24720.5 |
| peptidase m48 | AX777_10285 | Not Available | Negative | 1354365 - 1355711 | 48846.7 |
| ribonuclease | AX777_10290 | P44443 | Negative | 1355861 - 1358575 | 99686.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

