Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | AX777_09945 | Q9SD81 | Positive | 1289962 - 1291008 | 37871.1 |
| rrf2 family transcriptional regulator | AX777_09950 | O68025 | Positive | 1291103 - 1291528 | 15622.9 |
| hypothetical protein | AX777_09955 | Not Available | Positive | 1291572 - 1291967 | 14703.7 |
| hypothetical protein | AX777_09960 | P75849 | Positive | 1292022 - 1292678 | 23853.3 |
| gst-like protein | AX777_09965 | Not Available | Negative | 1292675 - 1293103 | 15294.5 |
| 50s ribosomal protein l32 | AX777_09970 | Q1GT88 | Positive | 1293310 - 1293489 | 6555.86 |
| phosphate acyltransferase | AX777_09975 | Q1GT89 | Positive | 1293556 - 1294581 | 35943.4 |
| 3-oxoacyl-acp synthase | AX777_09980 | A5VC86 | Positive | 1294578 - 1295546 | 33787.6 |
| integration host factor subunit alpha | AX777_09985 | A5VC87 | Positive | 1295672 - 1295968 | 10813.0 |
| transcriptional regulator | AX777_09990 | P30791 | Positive | 1296051 - 1296395 | 12652.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

