Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | AX777_09740 | Not Available | Negative | 1249782 - 1252655 | 100129.0 |
| peptidase m28 | AX777_09745 | Q6GQ29 | Positive | 1252880 - 1254484 | 58814.1 |
| proline hydroxylase | AX777_09750 | P9WLH6 | Negative | 1254521 - 1255228 | 26213.8 |
| methyltransferase | AX777_09755 | Not Available | Negative | 1255257 - 1256012 | 27445.0 |
| hypothetical protein | AX777_09760 | Not Available | Positive | 1256235 - 1256534 | 10531.6 |
| hypothetical protein | AX777_09765 | Not Available | Positive | 1256651 - 1257325 | 24036.1 |
| hypothetical protein | AX777_09770 | Not Available | Positive | 1257336 - 1257752 | 14951.9 |
| nucleoside hydrolase | AX777_09775 | Q8LAC4 | Negative | 1257756 - 1258892 | 41512.0 |
| proline iminopeptidase | AX777_09780 | O32449 | Positive | 1258943 - 1259884 | 34862.1 |
| hypothetical protein | AX777_09785 | Not Available | Positive | 1259908 - 1260222 | 10787.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

