Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene dehydrogenase | AX777_09385 | P54978 | Positive | 1178537 - 1180018 | 54179.6 |
| decarboxylase | AX777_09390 | P48636 | Positive | 1180050 - 1180631 | 20845.2 |
| phytoene synthase | AX777_09395 | P22872 | Positive | 1180854 - 1181726 | 32173.6 |
| ammonia channel protein | AX777_09400 | P69680 | Negative | 1181862 - 1183208 | 46358.1 |
| transcriptional regulator | AX777_09405 | O54053 | Negative | 1183222 - 1183560 | 11928.5 |
| hypothetical protein | AX777_09410 | Not Available | Negative | 1183717 - 1184292 | 21271.8 |
| metalloprotease tldd | AX777_09415 | P0AGG9 | Negative | 1184380 - 1185822 | 50575.1 |
| hypothetical protein | AX777_09420 | Not Available | Negative | 1185879 - 1186106 | 7942.41 |
| hypothetical protein | AX777_09425 | Not Available | Negative | 1186161 - 1186340 | 6148.68 |
| Trna-val | Not Available | Not Available | Positive | 1186490 - 1186565 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

