Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase | AX777_01575 | Not Available | Positive | 1163559 - 1164545 | 36145.7 |
| peptidase m20 | AX777_01580 | Q8GGD4 | Negative | 1164542 - 1165918 | 48890.0 |
| hypothetical protein | AX777_01585 | Not Available | Negative | 1166014 - 1167024 | 37030.7 |
| peptidase s10 | AX777_01590 | Not Available | Negative | 1167253 - 1168767 | 55004.8 |
| mfs transporter | AX777_01595 | P40862 | Negative | 1168834 - 1170111 | 43688.2 |
| xre family transcriptional regulator | AX777_01600 | P9WMI0 | Negative | 1170260 - 1171657 | 51192.2 |
| isocitrate lyase | AX777_01605 | Q9I0K4 | Positive | 1171805 - 1173397 | 58430.2 |
| tat pathway signal protein | AX777_01610 | Not Available | Negative | 1173752 - 1175560 | 65749.0 |
| hypothetical protein | AX777_01615 | Not Available | Negative | 1175945 - 1176232 | 10541.8 |
| lycopene cyclase | AX777_09380 | Q01331 | Positive | 1177389 - 1178537 | 42422.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

