Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain CD09_2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
979193 bp
Thymine Count
988684 bp
Guanine Count
1771524 bp
Cytosine Count
1764150 bp
Genome Length
5503838 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-(hydroxymethyl)glutathione dehydrogenase | AX777_16600 | Not Available | Positive | 107955 - 109064 | 39089.0 |
| excinuclease abc subunit a | AX777_16605 | Not Available | Positive | 109527 - 112118 | 94062.2 |
| glutamine amidotransferase | AX777_16610 | P80876 | Negative | 112375 - 112944 | 19803.3 |
| aldehyde dehydrogenase | AX777_16615 | Q9HTE3 | Negative | 112976 - 114115 | 41295.2 |
| cobalamin adenosyltransferase | AX777_16620 | Not Available | Negative | 114415 - 114825 | 13949.7 |
| antibiotic biosynthesis monooxygenase | AX777_16625 | Not Available | Negative | 114936 - 115229 | 10618.7 |
| oxidoreductase | AX777_16630 | Not Available | Negative | 115340 - 116080 | 25594.8 |
| antibiotic biosynthesis monooxygenase | AX777_16635 | O86332 | Negative | 116286 - 116582 | 10870.8 |
| glutamine amidotransferase | AX777_16640 | Not Available | Negative | 116654 - 117448 | 27864.7 |
| lysr family transcriptional regulator | AX777_16645 | P10183 | Positive | 117562 - 118497 | 34412.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

