Paenibacillus crassostreae strain LPB0068 PNBC_45

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus crassostreae strain LPB0068 PNBC_45 is a Gram-positive bacterium characterized by a single replicon. This strain is part of the Paenibacillus genus, which is known for its diverse metabolic capabilities and ecological significance. The genomic information for strain LPB0068 is available under the accession number LSFN00000000.1. The Gram-positive nature of Paenibacillus crassostreae suggests that it possesses a thick peptidoglycan layer in its cell wall, which is a defining feature of this group. This structural characteristic may contribute to its resilience in various environments, enabling it to thrive in different ecological niches. Understanding the traits of Paenibacillus crassostreae LPB0068 can provide insights into its potential applications in biotechnology and environmental sciences. Given the ecological diversity of the Paenibacillus genus, this strain may play a role in soil health, organic matter decomposition, or even in symbiotic relationships with other organisms. The identification of its genetic material and understanding its biological functions could pave the way for further research into its applications, particularly in agriculture or bioremediation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus crassostreae
Strainstrain LPB0068 PNBC_45

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus crassostreae strain LPB0068 PNBC_45, whole genome

Gene Summary

Adenine Count

1396540 bp

Thymine Count

1399509 bp

Guanine Count

903852 bp

Cytosine Count

945659 bp

Genome Length

4645560 bp

Protein-coding Genes

4079 genes

Non-Coding Genes

156 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome-binding factor aPNBC_04675Not AvailableNegative1034239 - 103458613082.9
translation initiation factor if-2PNBC_04680Not AvailableNegative1034601 - 103710590663.8
50s ribosomal protein l7aePNBC_04685Not AvailableNegative1037098 - 103742111739.4
nucleic-acid-binding proteinPNBC_04690Not AvailableNegative1037414 - 103772211515.1
transcription termination/antitermination protein nusaPNBC_04695Not AvailableNegative1037752 - 103884941195.4
ribosome maturation factor rimpPNBC_04700Not AvailableNegative1038883 - 103934417428.9
dna polymerase iii subunit alphaPNBC_04705Not AvailableNegative1039588 - 1043904162332.0
proline--trna ligasePNBC_04710Not AvailableNegative1044059 - 104550755498.1
rip metalloprotease rsepPNBC_04715Not AvailableNegative1045614 - 104688546893.3
1-deoxy-d-xylulose 5-phosphate reductoisomerasePNBC_04720Not AvailableNegative1047018 - 104815741649.1

Displaying genes 1011 – 1020 of 4235 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.