Frankia sp. EI5c UG55_1159

Gram-positiveFilamentous

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Frankia

Description

Frankia sp. EI5c UG55_1159 is a Gram-positive, filamentous bacterium characterized by its unique morphological and genetic traits. This organism possesses a single replicon, which is an important feature for understanding its genetic organization and replication dynamics. The taxonomic identification of Frankia sp. EI5c UG55_1159 is supported by its accession number LRTK00000000.1, which serves as a reference for further genetic studies and comparisons within the Frankia genus. Frankia species are well-known for their role in forming symbiotic relationships with plant roots, particularly in actinorhizal plants. This symbiosis facilitates nitrogen fixation, a process critical for enriching soil nutrient content and supporting plant growth in nutrient-poor environments. The filamentous structure of Frankia sp. EI5c UG55_1159 may contribute to its ability to colonize plant roots and establish mutualistic associations. In summary, Frankia sp. EI5c UG55_1159 exemplifies the characteristics of a Gram-positive, filamentous bacterium with a single replicon. Its potential role in symbiotic nitrogen fixation underscores its ecological significance, particularly in maintaining soil health and supporting the growth of specific plant communities. Further research on this strain may provide insights into its functional capabilities and contributions to ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusFrankia
SpeciesFrankia sp. EI5c
StrainUG55_1159

Profile

Physiology
Gram staining propertiesPositive
ShapeFilamentous
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Frankia sp. EI5c UG55_1159
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frankia sp. EI5c UG55_1159, whole genome shotgun sequence.

Gene Summary

Adenine Count

925610 bp

Thymine Count

914003 bp

Guanine Count

2368067 bp

Cytosine Count

2406676 bp

Genome Length

6618439 bp

Protein-coding Genes

3023 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid/amide abc transporter substrate-binding protein, haat familyUG55_102522Not AvailableNegative436018 - 43736145589.3
tatd dnase family proteinUG55_102523Not AvailablePositive437480 - 43833130070.6
dimethyladenosine transferaseUG55_102524Not AvailablePositive438562 - 43920622423.2
tryptophanyl-trna synthetaseUG55_102525Not AvailableNegative439308 - 44030936250.3
ribose-phosphate pyrophosphokinaseUG55_102526Not AvailableNegative440446 - 44142035046.0
glucosamine-1-phosphate n-acetyltransferase / udp-n-acetylglucosamine pyrophosphorylaseUG55_102527Not AvailableNegative441766 - 44317248196.5
hypothetical proteinUG55_102529Not AvailableNegative443746 - 4439947839.98
stearoyl-coa desaturase (delta-9 desaturase)UG55_102530Not AvailablePositive444401 - 44542337268.6
atpase component of abc transporters with duplicated atpase domainUG55_102531Not AvailableNegative445443 - 44726965622.2
4-diphosphocytidyl-2-c-methyl-d-erythritol kinaseUG55_102532Not AvailableNegative447304 - 44834434285.5

Displaying genes 361 – 370 of 3023 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.