Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Gardnerella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Gardnerella |
| Species | Gardnerella vaginalis |
| Strain | strain GED7760B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
416256 bp
Thymine Count
426458 bp
Guanine Count
322926 bp
Cytosine Count
320011 bp
Genome Length
1485651 bp
Protein-coding Genes
1272 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha amylase, catalytic domain protein | HMPREF3216_00320 | Not Available | Negative | 366554 - 368506 | 72633.6 |
| cytidine and deoxycytidylate deaminase zinc-binding region | HMPREF3216_00321 | Not Available | Negative | 368703 - 369158 | 16077.2 |
| phospholipase/carboxylesterase | HMPREF3216_00322 | Not Available | Negative | 369188 - 369982 | 28695.3 |
| dctp deaminase | HMPREF3216_00323 | Not Available | Negative | 370266 - 370847 | 21690.5 |
| putative calcium-translocating p-type atpase, pmca-type | HMPREF3216_00324 | Not Available | Negative | 370946 - 373903 | 104446.0 |
| rna methyltransferase, trmh family, group 3 | HMPREF3216_00325 | Not Available | Positive | 374114 - 375109 | 35419.6 |
| hypothetical protein | HMPREF3216_00326 | Not Available | Positive | 375155 - 376900 | 65655.2 |
| nitroreductase family protein | HMPREF3216_00327 | Not Available | Negative | 376903 - 377613 | 26153.1 |
| trypsin | HMPREF3216_00328 | Not Available | Negative | 377623 - 379554 | 66241.8 |
| pp_00321 | HMPREF3216_00329 | Not Available | Positive | 379848 - 381173 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Pyogenic osteomyelitis | Causes | PMC7852921 |
| Bacterial vaginosis | Causes | PMC11597594 |
| Bacterial vaginosis | Causes | PMC11782042 |
| Utis | Causes | PMC11782042 |
| Bacterial vaginosis | Causes | PMC12054147 |
| Bv | Causes | PMC12519793 |
| Bv | Causes | PMC12800088 |
| Bacterial vaginosis | Causes | PMC13228082 |
| Bv | Causes | PMC13228082 |
| Bacterial vaginosis | Causes | PMC12281154 |


