Roseivirga spongicola strain UST030701-084

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Roseivirgaceae

Genus

Roseivirga

Description

Roseivirga spongicola strain UST030701-084 is a Gram-negative, aerobic, motile bacterium characterized by its rod shape. This strain thrives at an optimal temperature of 25°C and is classified as mesophilic, indicating its preference for moderate temperature conditions. The strain possesses a single replicon and is non-spore-forming, which suggests that it relies on other mechanisms for survival and reproduction in its environment. The lack of sporulation indicates that Roseivirga spongicola strain UST030701-084 is likely adapted to stable environments where conditions do not frequently fluctuate to extremes that would necessitate spore formation for survival. The ecological role of Roseivirga spongicola strain UST030701-084 may be significant, particularly in marine ecosystems where it was initially isolated. Its aerobic nature suggests that it plays a role in the decomposition of organic materials, contributing to nutrient cycling within its habitat. The motility of this strain may also enhance its ability to access nutrients and colonize various niches within its environment, supporting its survival and ecological function. In summary, the characteristics of Roseivirga spongicola strain UST030701-084, including its Gram-negative nature, aerobic metabolism, mesophilic temperature preference, and motility, provide insights into its potential ecological roles, particularly in nutrient cycling in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyRoseivirgaceae
GenusRoseivirga
SpeciesRoseivirga spongicola
Strainstrain UST030701-084

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseivirga spongicola strain UST030701-084 contig_9, whole genome

Gene Summary

Adenine Count

1330527 bp

Thymine Count

1348267 bp

Guanine Count

909863 bp

Cytosine Count

892442 bp

Genome Length

4481099 bp

Protein-coding Genes

3854 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sterol desaturaseAWW68_01050Not AvailablePositive237068 - 23784431018.6
2-hydroxymuconic semialdehyde dehydrogenaseAWW68_01055Not AvailableNegative238151 - 23959352425.9
short-chain dehydrogenaseAWW68_01060Not AvailableNegative239595 - 24038327527.9
3-hydroxyanthranilate 3,4-dioxygenaseAWW68_01065Not AvailablePositive240475 - 24100520502.4
four helix bundle proteinAWW68_01070Not AvailablePositive241085 - 24145014276.0
2-amino-3-carboxymuconate-6-semialdehyde decarboxylaseAWW68_01075Not AvailablePositive241476 - 24249538841.8
cysteine methyltransferaseAWW68_01080Not AvailablePositive242492 - 24298918494.4
kynureninaseAWW68_01085Not AvailablePositive242986 - 24427248998.1
kynurenine 3-monooxygenaseAWW68_01090Not AvailablePositive244403 - 24572549638.3
hypothetical proteinAWW68_01095Not AvailableNegative245712 - 24657233303.2

Displaying genes 211 – 220 of 3899 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.