Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 102928 jtg7180000001263f_7180000001325f |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1306316 bp
Thymine Count
1307496 bp
Guanine Count
1332954 bp
Cytosine Count
1326994 bp
Genome Length
5273760 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
419 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein | AWP75_20130 | Not Available | Positive | 3769237 - 3770418 | 44975.2 |
| escf/yscf/hrpa family type iii secretion system needle major subunit | AWP75_20135 | Not Available | Positive | 3770432 - 3770671 | 9038.44 |
| hypothetical protein | AWP75_20140 | Not Available | Positive | 3770691 - 3771023 | 12271.6 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | AWP75_20145 | Not Available | Positive | 3771020 - 3771754 | 27763.8 |
| type iii secretion apparatus protein orga/mxik | AWP75_20150 | Not Available | Positive | 3771770 - 3772351 | 22789.9 |
| hypothetical protein | AWP75_20160 | Not Available | Positive | 3772569 - 3773000 | 16780.8 |
| luxr family transcriptional regulator | AWP75_20170 | Not Available | Positive | 3773223 - 3773855 | 23427.7 |
| lytic transglycosylase | AWP75_20175 | Not Available | Negative | 3773873 - 3774376 | 19237.9 |
| hypothetical protein | AWP75_20180 | Not Available | Negative | 3774460 - 3774678 | 8184.36 |
| transcriptional regulator | AWP75_20185 | Not Available | Negative | 3774845 - 3776221 | 52809.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





