Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 102928 jtg7180000001263f_7180000001325f |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1306316 bp
Thymine Count
1307496 bp
Guanine Count
1332954 bp
Cytosine Count
1326994 bp
Genome Length
5273760 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
419 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cesd/sycd/lcrh family type iii secretion system chaperone | AWP75_16500 | Not Available | Positive | 3113255 - 3113752 | 19069.7 |
| hypothetical protein | AWP75_16505 | Not Available | Positive | 3113762 - 3113944 | 6970.22 |
| type iii cell invasion protein sipb | AWP75_16510 | Not Available | Positive | 3113998 - 3115779 | 64588.7 |
| type iii effector | AWP75_16520 | Not Available | Positive | 3116957 - 3118306 | 50164.8 |
| transcriptional regulator | AWP75_16525 | Not Available | Positive | 3118509 - 3120206 | 63926.9 |
| invasin | AWP75_16530 | Not Available | Negative | 3120258 - 3129644 | 325987.0 |
| mfs transporter | AWP75_16535 | Not Available | Negative | 3129847 - 3131031 | 41578.2 |
| hypothetical protein | AWP75_16540 | Not Available | Negative | 3131115 - 3131306 | 7354.17 |
| addiction module toxin rele | AWP75_16545 | Not Available | Positive | 3131259 - 3131618 | 13711.5 |
| transcriptional regulator | AWP75_16550 | Not Available | Positive | 3131602 - 3131925 | 11639.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





