Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 102928 jtg7180000001263f_7180000001325f |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1306316 bp
Thymine Count
1307496 bp
Guanine Count
1332954 bp
Cytosine Count
1326994 bp
Genome Length
5273760 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
419 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AWP75_16395 | Not Available | Positive | 3090001 - 3090183 | 6633.33 |
| yicc family protein | AWP75_16400 | Not Available | Positive | 3090196 - 3091059 | 33160.9 |
| hypothetical protein | AWP75_16405 | Not Available | Positive | 3091311 - 3091928 | 22049.8 |
| dna ligase b | AWP75_16410 | Not Available | Negative | 3091925 - 3093607 | 63451.1 |
| guanylate kinase | AWP75_16415 | Not Available | Positive | 3093865 - 3094488 | 23594.1 |
| dna-directed rna polymerase subunit omega | AWP75_16420 | Not Available | Positive | 3094543 - 3094818 | 10237.2 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | AWP75_16425 | Not Available | Positive | 3094837 - 3096945 | 79316.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | AWP75_16430 | Not Available | Positive | 3096952 - 3097641 | 25344.6 |
| atp-dependent dna helicase recg | AWP75_16435 | Not Available | Positive | 3097647 - 3099728 | 76542.3 |
| sodium/glutamate symporter | AWP75_16440 | Not Available | Negative | 3099917 - 3101122 | 42445.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





