Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 102928 jtg7180000001263f_7180000001325f |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1306316 bp
Thymine Count
1307496 bp
Guanine Count
1332954 bp
Cytosine Count
1326994 bp
Genome Length
5273760 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
419 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| invasion protein | AWP75_08995 | Not Available | Positive | 1624948 - 1625070 | 4685.74 |
| cholera enterotoxin subunit a2 | AWP75_09000 | Not Available | Positive | 1625271 - 1626047 | 29874.9 |
| cholera enterotoxin subunit b | AWP75_09005 | Not Available | Positive | 1626044 - 1626418 | 14029.0 |
| hypothetical protein | AWP75_09010 | Not Available | Negative | 1626740 - 1627213 | 18269.7 |
| transposase | AWP75_09015 | Not Available | Positive | 1627279 - 1627578 | 11571.8 |
| transposase | AWP75_09050 | Not Available | Negative | 1630920 - 1631219 | 11571.8 |
| is30 family transposase | AWP75_09055 | Not Available | Negative | 1631282 - 1631525 | 9066.91 |
| gntr family transcriptional regulator | AWP75_09075 | Not Available | Positive | 1634524 - 1635216 | 26105.6 |
| mfs transporter | AWP75_09080 | Not Available | Positive | 1635239 - 1636666 | 51481.0 |
| transcriptional regulator rbsr | AWP75_09085 | Not Available | Negative | 1636632 - 1637624 | 36614.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





