Parageobacillus toebii strain B4110

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Anoxybacillaceae

Genus

Parageobacillus

Description

Parageobacillus toebii strain B4110 is a rod-shaped bacterium characterized by a single replicon. This strain is cataloged under accession number LQYW00000000.1, which is essential for its identification and classification in microbiological databases. The rod shape of Parageobacillus toebii indicates its classification within the Bacillaceae family, which typically includes various rod-shaped, endospore-forming bacteria. The single replicon is significant as it reflects a streamlined genomic architecture, which can impact the organism's replication and adaptation processes in its environment. Understanding the characteristics of Parageobacillus toebii strain B4110 can provide insights into its ecological roles. As a member of the Bacillaceae family, this strain may contribute to soil health and nutrient cycling, utilizing organic matter and potentially aiding in the decomposition process. The study of such bacteria can reveal their interactions within microbial communities and their responses to environmental changes, contributing to our understanding of ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyAnoxybacillaceae
GenusParageobacillus
SpeciesParageobacillus toebii
Strainstrain B4110

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parageobacillus toebii strain B4110 NODE_623, whole genome shotgun

Gene Summary

Adenine Count

1014862 bp

Thymine Count

1023258 bp

Guanine Count

727401 bp

Cytosine Count

757976 bp

Genome Length

3527506 bp

Protein-coding Genes

3764 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinB4110_2748P46343Positive244702 - 24566435172.0
hypothetical proteinB4110_2749P46344Positive245719 - 24782479631.7
hypothetical proteinB4110_2750C5D4S8Positive247821 - 24829117877.3
diacylglycerol kinaseB4110_2751P19638Positive248295 - 24864812700.2
cytidine deaminaseB4110_2752P19079Positive248776 - 24917414437.4
hypothetical proteinB4110_2753P42182Positive249167 - 25007534601.2
hypothetical proteinB4110_2754C0H452Positive250174 - 2503175624.55
hypothetical proteinB4110_2755C5D4S3Positive250347 - 25113830059.5
hypothetical proteinB4110_2756O34994Positive251295 - 25189422037.2
hypothetical proteinB4110_2757C5D4S1Positive251915 - 25271530138.0

Displaying genes 351 – 360 of 3901 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

187 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da

Displaying 1–10 of 187 metabolites

Health Effects

No health effects information available for this bacterium.