Vibrio barjaei strain 3062

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio barjaei strain 3062 is characterized by having a single replicon, which indicates a streamlined genetic structure that may contribute to its adaptability and stability in various environments. This strain is cataloged under the accession number LQXO00000000.2, providing a reference point for researchers interested in studying its genomic features or evolutionary relationships. The presence of a single replicon suggests that Vibrio barjaei strain 3062 may possess efficient mechanisms for replication and gene expression. This trait can be advantageous for survival in fluctuating conditions, allowing for rapid growth and reproduction when resources are available. Such efficiency is commonly observed in organisms that thrive in dynamic ecosystems, particularly in marine environments where nutrient availability can vary. Biologically, Vibrio species, including Vibrio barjaei, are known for their roles in marine ecosystems, often interacting with other microorganisms and contributing to nutrient cycling. Their adaptability and metabolic versatility enable them to occupy various ecological niches, which can influence the overall health and dynamics of their habitats. The study of strains like Vibrio barjaei 3062 can provide insights into the ecological functions of Vibrio species in marine microbiomes and their potential impacts on marine biodiversity and biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio barjaei
Strainstrain 3062

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio barjaei strain 3062
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio barjaei strain 3062 NODE_9_length_79965_cov_58.221771,

Gene Summary

Adenine Count

1541171 bp

Thymine Count

1549188 bp

Guanine Count

1250686 bp

Cytosine Count

1194054 bp

Genome Length

5535129 bp

Protein-coding Genes

4780 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphonate utilization transcriptional regulator phnrAWH66_2004655Not AvailableNegative5025138 - 502584227082.3
phosphonate abc transporter permeaseAWH66_2004660Not AvailableNegative5025870 - 502757361950.2
phosphonate abc transporter atp-binding proteinAWH66_2004665Not AvailableNegative5027619 - 502872540659.1
putative 2-aminoethylphosphonate abc transporter substrate-binding proteinAWH66_2004670Not AvailableNegative5028927 - 502993436525.6
2-aminoethylphosphonate--pyruvate transaminaseAWH66_2004675Not AvailablePositive5030159 - 503126240853.9
diaminopimelate epimeraseAWH66_2020200Not AvailableNegative5031893 - 503272330407.4
diaminopimelate decarboxylaseAWH66_2020205Not AvailableNegative5032734 - 503398745913.5
iron donor protein cyayAWH66_2020210Not AvailablePositive5034218 - 503453211921.9
adenylate cyclaseAWH66_2020215Not AvailableNegative5034529 - 503705497048.7
hydroxymethylbilane synthaseAWH66_2020220Not AvailablePositive5037401 - 503833934158.3

Displaying genes 4521 – 4530 of 4780 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.