Vibrio barjaei strain 3062

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio barjaei strain 3062 is characterized by having a single replicon, which indicates a streamlined genetic structure that may contribute to its adaptability and stability in various environments. This strain is cataloged under the accession number LQXO00000000.2, providing a reference point for researchers interested in studying its genomic features or evolutionary relationships. The presence of a single replicon suggests that Vibrio barjaei strain 3062 may possess efficient mechanisms for replication and gene expression. This trait can be advantageous for survival in fluctuating conditions, allowing for rapid growth and reproduction when resources are available. Such efficiency is commonly observed in organisms that thrive in dynamic ecosystems, particularly in marine environments where nutrient availability can vary. Biologically, Vibrio species, including Vibrio barjaei, are known for their roles in marine ecosystems, often interacting with other microorganisms and contributing to nutrient cycling. Their adaptability and metabolic versatility enable them to occupy various ecological niches, which can influence the overall health and dynamics of their habitats. The study of strains like Vibrio barjaei 3062 can provide insights into the ecological functions of Vibrio species in marine microbiomes and their potential impacts on marine biodiversity and biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio barjaei
Strainstrain 3062

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio barjaei strain 3062
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio barjaei strain 3062 NODE_9_length_79965_cov_58.221771,

Gene Summary

Adenine Count

1541171 bp

Thymine Count

1549188 bp

Guanine Count

1250686 bp

Cytosine Count

1194054 bp

Genome Length

5535129 bp

Protein-coding Genes

4780 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane lipoprotein-sorting proteinAWH66_2003255Not AvailableNegative4715485 - 471623728749.6
glucose-1-phosphate adenylyltransferaseAWH66_2003260Not AvailablePositive4716536 - 471775644616.2
hypothetical proteinAWH66_2003265Not AvailablePositive4718345 - 471895020678.1
aldehyde reductaseAWH66_2003270Not AvailablePositive4719098 - 472024041535.4
transcriptional repressor purrAWH66_2003275Not AvailableNegative4720337 - 472134137149.1
ribokinaseAWH66_2003280Not AvailableNegative4721401 - 472232132050.2
d-ribose abc transporter substrate-binding protein rbsbAWH66_2003285Not AvailableNegative4722473 - 472335130675.9
ribose abc transporter permeaseAWH66_2003290Not AvailableNegative4723427 - 472440734283.0
ribose abc transporter atp-binding protein rbsaAWH66_2003295Not AvailableNegative4724404 - 472590954599.1
d-ribose pyranaseAWH66_2003300Not AvailableNegative4725943 - 472636215294.3

Displaying genes 4241 – 4250 of 4780 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.