Vibrio barjaei strain 3062

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio barjaei strain 3062 is characterized by having a single replicon, which indicates a streamlined genetic structure that may contribute to its adaptability and stability in various environments. This strain is cataloged under the accession number LQXO00000000.2, providing a reference point for researchers interested in studying its genomic features or evolutionary relationships. The presence of a single replicon suggests that Vibrio barjaei strain 3062 may possess efficient mechanisms for replication and gene expression. This trait can be advantageous for survival in fluctuating conditions, allowing for rapid growth and reproduction when resources are available. Such efficiency is commonly observed in organisms that thrive in dynamic ecosystems, particularly in marine environments where nutrient availability can vary. Biologically, Vibrio species, including Vibrio barjaei, are known for their roles in marine ecosystems, often interacting with other microorganisms and contributing to nutrient cycling. Their adaptability and metabolic versatility enable them to occupy various ecological niches, which can influence the overall health and dynamics of their habitats. The study of strains like Vibrio barjaei 3062 can provide insights into the ecological functions of Vibrio species in marine microbiomes and their potential impacts on marine biodiversity and biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio barjaei
Strainstrain 3062

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio barjaei strain 3062
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio barjaei strain 3062 NODE_9_length_79965_cov_58.221771,

Gene Summary

Adenine Count

1541171 bp

Thymine Count

1549188 bp

Guanine Count

1250686 bp

Cytosine Count

1194054 bp

Genome Length

5535129 bp

Protein-coding Genes

4780 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide chain release factor 1AWH66_2021050Not AvailablePositive393377 - 39446540142.2
protein-(glutamine-n5) methyltransferase, release factor-specificAWH66_2021055Not AvailablePositive394469 - 39532331019.7
hypothetical proteinAWH66_2021060Not AvailablePositive395357 - 39574014051.0
hypothetical proteinAWH66_2021065Not AvailablePositive395744 - 39655330893.9
3-deoxy-8-phosphooctulonate synthaseAWH66_2021070Not AvailablePositive396571 - 39742230872.4
bifunctional udp-sugar hydrolase/5'-nucleotidaseAWH66_2021075Not AvailablePositive397796 - 39946061110.7
aminoacyl-trna deacylaseAWH66_2021080Not AvailablePositive399578 - 40005417015.8
23s rrna pseudouridine synthase fAWH66_2021085Not AvailableNegative400075 - 40110338467.4
dna mismatch repair protein mutsAWH66_2021090Not AvailableNegative401180 - 40176122569.3
duf3149 domain-containing proteinAWH66_2021095Not AvailableNegative401901 - 4020415191.52

Displaying genes 351 – 360 of 4780 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.