Escherichia coli strain GN02175 6_arrow

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain GN02175 6_arrow is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. This strain is motile and possesses flagella, contributing to its ability to navigate its host-associated habitats. The optimal growth temperature for GN02175 is 37°C, within the mesophilic range. This strain is notably versatile in its biotic relationships, being free-living and capable of associating with a wide array of hosts, including Homo sapiens, various livestock such as Bos taurus and Sus scrofa, and even plants like Solanum lycopersicum. The extensive list of potential hosts highlights its ecological adaptability. GN02175 is associated with a range of health effects, particularly in humans, where it can cause urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis, among other conditions. Its pathogenicity is a significant concern, given its involvement in severe health issues such as hemolytic uremic syndrome (HUS) and peritonitis. These associations underpin the importance of monitoring this strain in clinical settings, as it can lead to serious complications, including renal failure and septicemia. The diversity of hosts and the variety of health effects linked to strain GN02175 emphasize its ecological significance and potential impact on both human health and animal welfare. Understanding the interactions between this strain and its hosts can provide insights into the epidemiology of E. coli infections and the mechanisms of its pathogenicity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain GN02175 6_arrow

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain GN02175 6_arrow
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain GN02175 6_arrow


Gene Summary

Adenine Count

1325874 bp

Thymine Count

1329074 bp

Guanine Count

1363961 bp

Cytosine Count

1349874 bp

Genome Length

5368783 bp

Protein-coding Genes

4737 genes

Non-Coding Genes

596 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Transcriptional regulatorAWE53_007195Not AvailablePositive1408444 - 140872811247.2
hypotheticalAWE53_007200Not AvailablePositive1408998 - 140944116746.1
host cell division inhibitor icd-like proteinAWE53_007205Not AvailablePositive1410107 - 14102987178.71
hypothetical proteinAWE53_007210Not AvailablePositive1410291 - 14104857181.64
hypothetical proteinAWE53_007215Not AvailablePositive1410482 - 14106977906.51
duf4222 domain-containing proteinAWE53_007220Not AvailablePositive1410684 - 14108757559.96
Dna primaseAWE53_007225Not AvailablePositive1410859 - 141261064718.6
hypothetical proteinAWE53_007230Not AvailablePositive1412908 - 141316810140.8
hypothetical proteinAWE53_007235Not AvailableNegative1413207 - 141372819699.7
hypothetical proteinAWE53_007240Not AvailableNegative1413730 - 141476439084.8

Displaying genes 61 – 70 of 5333 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total