Streptococcus gordonii strain DD07

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus gordonii strain DD07 is a Gram-positive bacterium characterized by its cocci shape and arrangement in chains or pairs. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. It is non-motile and does not possess flagella, indicating that it does not move independently. The optimal growth temperature for S. gordonii strain DD07 is 37°C, which aligns with the average human body temperature, suggesting its adaptation to a host-associated habitat, specifically in humans (Homo sapiens). This mesophilic organism has a single replicon and a single membrane, features that are typical of many bacteria in its class. As a free-living organism, S. gordonii strain DD07 plays a role in the microbial community associated with human hosts. Its presence is significant in the oral cavity, where it contributes to the complex biofilm structure of dental plaque. Understanding the traits of S. gordonii strain DD07 enhances our knowledge of its ecological role in human health and disease, particularly in relation to oral microbiota and potential implications for dental health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus gordonii
Strainstrain DD07

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Streptococcus gordonii strain DD07
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementChains - Pairs
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptococcus gordonii strain DD07 contig00326, whole genome

Gene Summary

Adenine Count

632812 bp

Thymine Count

646898 bp

Guanine Count

413812 bp

Cytosine Count

454902 bp

Genome Length

2148424 bp

Protein-coding Genes

2112 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent nuclease, subunit bSGODD07_00280A8AY34Positive282866 - 28371131693.8
atp-dependent nuclease, subunit aSGODD07_00281A3CNT9Positive286655 - 28723621795.2
histidinol-phosphate aminotransferaseSGODD07_00282A8AY31Positive287751 - 28880939333.8
atp phosphoribosyltransferaseSGODD07_00283A3CNT5Positive289526 - 29017023631.6
histidinol dehydrogenaseSGODD07_00284Q8DTQ7Positive290167 - 29145946882.7
imidazoleglycerol-phosphate dehydrataseSGODD07_00285A8AY27Positive291471 - 29205521585.8
imidazole glycerol phosphate synthase amidotransferase subunitSGODD07_00286A3CNT2Positive292090 - 29271322354.9
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomeraseSGODD07_00287A3CNT1Positive292691 - 29341325869.3
imidazole glycerol phosphate synthase cyclase subunitSGODD07_00288A3CNT0Positive293416 - 29371511020.2
imidazole glycerol phosphate synthase cyclase subunitSGODD07_00289A8AY24Positive293828 - 2940678150.8

Displaying genes 331 – 340 of 2195 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

98 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0001140cyclohexyl isocyanideC7H11NChemical structure of cyclohexyl isocyanideNot available
Average109.1689Da
Monoisotopic109.089149357Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001864Cr(6+)CrChemical structure of Cr(6+)Not available
Average51.9961Da
Monoisotopic51.9405119Da

Displaying 1–10 of 98 metabolites

Health Effects

No health effects information available for this bacterium.