Mycobacterium kubicae strain CIP 106428

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium kubicae strain CIP 106428 is characterized by the presence of flagella, which is significant as it indicates potential motility in this bacterium. The strain has a single replicon, suggesting a simplified genomic structure that may influence its replication and stability. The accession number for this strain is LQPD00000000.1, which can be used for further genomic studies and comparisons within the Mycobacterium genus. The presence of flagella in Mycobacterium kubicae may provide ecological insights, particularly regarding its adaptability and interactions within its environment. Flagella can enhance the bacterium's ability to navigate through various substrates or environments, which may be crucial for its survival and colonization. Understanding the motility of Mycobacterium kubicae could lead to deeper insights into its ecological role and potential pathogenicity, particularly in specific niches where motility could confer advantages in accessing nutrients or evading host defenses. Further research is necessary to explore these ecological implications and the full breadth of its biological significance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium kubicae
Strainstrain CIP 106428

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium kubicae strain CIP 106428 contig_99, whole genome

Gene Summary

Adenine Count

992706 bp

Thymine Count

989523 bp

Guanine Count

1927769 bp

Cytosine Count

1922570 bp

Genome Length

5832568 bp

Protein-coding Genes

5154 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseAWC13_01350Not AvailableNegative1022843 - 102365227810.2
aminodeoxychorismate lyaseAWC13_01355Not AvailableNegative1023649 - 102489345037.4
crossover junction endodeoxyribonuclease ruvaAWC13_01360Not AvailableNegative1024886 - 102541018708.2
alanine--trna ligaseAWC13_01365Not AvailableNegative1025411 - 102810796313.0
hypothetical proteinAWC13_01370Not AvailableNegative1028196 - 102859714549.2
hypothetical proteinAWC13_01375Not AvailablePositive1028750 - 102937323063.6
hypothetical proteinAWC13_01380Not AvailableNegative1029388 - 102972311722.0
aaa family atpaseAWC13_01385Not AvailableNegative1029720 - 103108147539.9
hypothetical proteinAWC13_01390Not AvailablePositive1031240 - 103231636490.4
hypothetical proteinAWC13_01395Not AvailablePositive1032463 - 103512995125.7

Displaying genes 871 – 880 of 5216 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.