Streptococcus oralis strain DD05

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus oralis strain DD05 is a Gram-positive, cocci-shaped bacterium that typically exists in pairs or chains. This strain is classified as a facultative anaerobe, indicating that it can thrive in both the presence and absence of oxygen. It is non-motile and does not possess flagella, which reflects its lifestyle as a host-associated organism primarily found in humans (Homo sapiens). S. oralis strain DD05 is mesophilic, meaning it grows optimally at moderate temperatures, which is characteristic of many bacteria that inhabit warm-blooded hosts. This strain is notable for its pathogenic potential, with documented associations with several serious health conditions, including endocarditis, peritonitis, meningitis, and invasive diseases. These health effects underscore its significance in clinical microbiology, particularly in contexts where it may contribute to infective endocarditis. The strain has a single replicon, which is typical for many bacteria and may have implications for its replication and genetic stability. The biotic relationship of strain DD05 is categorized as free-living, though its pathogenicity is specifically linked to human hosts. This dual nature highlights the ecological role of S. oralis as both a commensal organism in the human microbiome and a potential opportunistic pathogen. In summary, Streptococcus oralis strain DD05 exemplifies the complexity of microbial life, illustrating how certain strains can transition between beneficial and harmful roles in human health. Understanding its traits and behaviors can provide insights into managing infections caused by this organism.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus oralis
Strainstrain DD05

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Streptococcus oralis strain DD05
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Ovis aries
Cell arrangementPairs - Chains
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Streptococcus oralis strain DD05 contig00070, whole genome shotgun

Gene Summary

Adenine Count

565949 bp

Thymine Count

581899 bp

Guanine Count

380029 bp

Cytosine Count

418489 bp

Genome Length

1946366 bp

Protein-coding Genes

1874 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycerol-3-phosphate dehydrogenase (nad(p)+)SORDD05_01601Not AvailablePositive1637991 - 163900736683.8
utp--glucose-1-phosphate uridylyltransferaseSORDD05_01602Not AvailablePositive1639029 - 163993733571.6
glpg protein (membrane protein of glp regulon)SORDD05_01603Not AvailableNegative1639996 - 164067025166.7
5-formyltetrahydrofolate cyclo-ligaseSORDD05_01604Not AvailableNegative1640654 - 164119320607.8
n-acetyl-l,l-diaminopimelate deacetylaseSORDD05_01605Not AvailableNegative1641205 - 164233541567.9
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-acetyltransferaseSORDD05_01606Not AvailableNegative1642405 - 164310323922.0
permease of the drug/metabolite transporter (dmt) superfamilySORDD05_01607Not AvailableNegative1643189 - 164409733585.4
multimodular transpeptidase-transglycosylaseSORDD05_01608Not AvailableNegative1644179 - 164664189247.6
tyrosyl-trna synthetaseSORDD05_01609Not AvailablePositive1646782 - 164803847490.4
lead, cadmium, zinc and mercury transporting atpaseSORDD05_01610Not AvailableNegative1648116 - 165017677193.5

Displaying genes 1601 – 1610 of 1874 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
MeningitisCausesPMC6849159
Infective endocarditisCausesPMC6849159
Invasive diseaseCausesPMC9328907
EndocarditisCausesPMC3279804
PeritonitisCausesPMC7747055
Infective endocarditisCausesPMC3178606
Subacute infective endocarditisCausesPMC3178606

Displaying health effects 1 – 7 of 7 in total