Helicobacter pylori strain UM443R

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain UM443R is a Gram-negative, microaerophilic bacterium characterized by its spiral shape (spirilla) and presence of flagella. This strain is primarily host-associated, with a broad range of potential hosts, including Homo sapiens, various Aves, and other mammals. It has a single replicon and is classified as free-living, which indicates a certain degree of adaptability within its ecological niche. UM443R thrives optimally at 37°C and is categorized as mesophilic, reflecting its adaptation to the warm environment of the stomach. The bacterium is notable for its pathogenicity in humans, where it is implicated in a variety of gastrointestinal diseases. Health effects associated with this strain include chronic gastric inflammation, peptic ulcer disease, and various forms of gastric cancer, such as gastric adenocarcinoma and mucosa-associated lymphoid tissue lymphoma. Additionally, it contributes to conditions like gastroesophageal reflux disease (GERD) and functional dyspepsia. The presence of Helicobacter pylori in the gastrointestinal tract can lead to significant health complications, including chronic gastritis and ulcers. Its ability to survive and proliferate in the stomach, despite the acidic environment, underscores its ecological niche and pathogenic potential. Understanding the characteristics and impacts of UM443R can provide insights into the mechanisms behind gastric diseases and highlight its role in both human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain UM443R

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain UM443R
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain UM443R

Gene Summary

Adenine Count

501712 bp

Thymine Count

502524 bp

Guanine Count

309510 bp

Cytosine Count

320957 bp

Genome Length

1634703 bp

Protein-coding Genes

1447 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s11AV920_0200250Not AvailableNegative47882 - 4827714042.2
30s ribosomal protein s13AV920_0200255Not AvailableNegative48300 - 4866213515.7
50s ribosomal protein l36AV920_0200260Not AvailableNegative48666 - 487794321.68
translation initiation factor if-1AV920_0200265Not AvailableNegative48858 - 490768348.36
type i methionyl aminopeptidaseAV920_0200270Not AvailableNegative49076 - 4983727509.6
preprotein translocase subunit secyAV920_0200275Not AvailableNegative49837 - 5109945859.8
50s ribosomal protein l15AV920_0200280Not AvailableNegative51137 - 5153814590.8
30s ribosomal protein s5AV920_0200285Not AvailableNegative51556 - 5199915884.4
50s ribosomal protein l18AV920_0200290Not AvailableNegative52014 - 5237013464.4
50s ribosomal protein l6AV920_0200295Not AvailableNegative52384 - 5292019488.5

Displaying genes 51 – 60 of 1489 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total