Helicobacter pylori strain UM443R

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain UM443R is a Gram-negative, microaerophilic bacterium characterized by its spiral shape (spirilla) and presence of flagella. This strain is primarily host-associated, with a broad range of potential hosts, including Homo sapiens, various Aves, and other mammals. It has a single replicon and is classified as free-living, which indicates a certain degree of adaptability within its ecological niche. UM443R thrives optimally at 37°C and is categorized as mesophilic, reflecting its adaptation to the warm environment of the stomach. The bacterium is notable for its pathogenicity in humans, where it is implicated in a variety of gastrointestinal diseases. Health effects associated with this strain include chronic gastric inflammation, peptic ulcer disease, and various forms of gastric cancer, such as gastric adenocarcinoma and mucosa-associated lymphoid tissue lymphoma. Additionally, it contributes to conditions like gastroesophageal reflux disease (GERD) and functional dyspepsia. The presence of Helicobacter pylori in the gastrointestinal tract can lead to significant health complications, including chronic gastritis and ulcers. Its ability to survive and proliferate in the stomach, despite the acidic environment, underscores its ecological niche and pathogenic potential. Understanding the characteristics and impacts of UM443R can provide insights into the mechanisms behind gastric diseases and highlight its role in both human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain UM443R

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain UM443R
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain UM443R

Gene Summary

Adenine Count

501712 bp

Thymine Count

502524 bp

Guanine Count

309510 bp

Cytosine Count

320957 bp

Genome Length

1634703 bp

Protein-coding Genes

1447 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAV920_0205985Not AvailableNegative1219156 - 12193386436.92
translation elongation factor gAV920_0205990Not AvailableNegative1219871 - 122194977088.5
30s ribosomal protein s7AV920_0205995Not AvailableNegative1221961 - 122242817988.0
30s ribosomal protein s12AV920_0206000Not AvailableNegative1222444 - 122285115106.7
dna-directed rna polymerase subunit beta/beta'AV920_0206005Not AvailableNegative1222939 - 1231611323729.0
50s ribosomal protein l7/l12AV920_0206010Not AvailableNegative1231837 - 123221413345.1
50s ribosomal protein l10AV920_0206015Not AvailableNegative1232259 - 123275318637.7
50s ribosomal protein l1AV920_0206020Not AvailableNegative1232862 - 123356625295.0
50s ribosomal protein l11AV920_0206025Not AvailableNegative1233611 - 123403615329.9
transcription termination/antitermination protein nusgAV920_0206030Not AvailableNegative1234053 - 123458020131.2

Displaying genes 1131 – 1140 of 1489 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total