Helicobacter pylori strain UM303S

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain UM303S is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and presence of flagella. This strain is typically found in host-associated habitats, primarily affecting Homo sapiens and other species including Gallus gallus, Aves, Primates, Mammalia, Amoeba, Rodentia, and Cricetinae. UM303S displays a single cell arrangement and is classified as free-living within its host environments. The optimal growth temperature for UM303S is 37°C, making it mesophilic, with a viable temperature range that supports its survival in the human gastric environment. The bacterium has a single replicon and is surrounded by two membranes. Helicobacter pylori UM303S is notably associated with a range of health effects, primarily linked to chronic gastric inflammation and various gastric diseases. These include conditions such as gastric cancer, gastric ulcers, mucosa-associated lymphoid tissue lymphoma, and functional dyspepsia. The strain is implicated in peptic ulcer disease and can induce an asymptomatic mucosal inflammatory response, which may progress to more severe gastrointestinal diseases, including atrophic gastritis and dysplasia. The ecological insight derived from the traits of UM303S suggests a complex interaction with its host, where it can lead to significant health challenges while maintaining a free-living biotic relationship. This duality highlights the importance of understanding such pathogenic strains in the context of human health and disease management. The strain's ability to cause a spectrum of gastrointestinal disorders underscores the need for ongoing research into its pathogenic mechanisms and potential therapeutic interventions.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain UM303S

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain UM303S
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain UM303S

Gene Summary

Adenine Count

489331 bp

Thymine Count

485022 bp

Guanine Count

307257 bp

Cytosine Count

308021 bp

Genome Length

1589631 bp

Protein-coding Genes

1410 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s16AV921_0205825Not AvailablePositive1195628 - 11958588972.0
rna-binding proteinAV921_0205830Not AvailablePositive1195875 - 119622212828.4
16s rrna processing protein rimmAV921_0205835Not AvailablePositive1196223 - 119677720853.6
trna (guanosine(37)-n1)-methyltransferase trmdAV921_0205840Not AvailablePositive1196778 - 119746725807.3
50s ribosomal protein l19AV921_0205845Not AvailablePositive1197489 - 119784513586.6
nucleaseAV921_0205850Not AvailablePositive1198208 - 119897229593.5
arginine decarboxylaseAV921_0205860Not AvailableNegative1199689 - 120153670280.3
glycosyl transferase family 1AV921_0205865Not AvailableNegative1201551 - 120272044997.5
thioesteraseAV921_0205870Not AvailableNegative1202725 - 120315316130.5
trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmobAV921_0205875Not AvailableNegative1203170 - 120395529918.5

Displaying genes 1111 – 1120 of 1452 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total