Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 is a notable species within the genus Amycolatopsis, characterized by its potential for keratin degradation. A key trait of this strain is the presence of flagella, which may contribute to its motility and ecological adaptability in various environments. The strain possesses a single replicon, indicating a streamlined genetic architecture that may facilitate efficient replication and adaptation. Its genetic information is accessible under the accession number LQMT00000000.2, which serves as a reference for researchers studying its genomic characteristics and metabolic capabilities. The ability of Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 to degrade keratin suggests its ecological role in nutrient cycling, particularly in environments rich in keratinous materials such as feathers, hair, and hooves. By breaking down these complex substrates, this strain can contribute to the decomposition process and aid in the recycling of nitrogen and carbon in its habitat. Overall, the combination of motility, genetic simplicity, and keratin degradation capabilities positions Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 as an important organism in microbial ecology and bioremediation efforts involving keratin-rich waste.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis keratiniphila
Strainsubsp. keratiniphila strain DSM 44409

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409

Gene Summary

Adenine Count

1406105 bp

Thymine Count

1409230 bp

Guanine Count

3130028 bp

Cytosine Count

3135989 bp

Genome Length

9091838 bp

Protein-coding Genes

8217 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gntr family transcriptional regulatorAVR91_0204675Not AvailablePositive999411 - 100008225545.5
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseAVR91_0204680Not AvailablePositive1000096 - 100160153975.9
3,4-dihydroxyphenylacetate 2,3-dioxygenaseAVR91_0204685Not AvailablePositive1001614 - 100272942007.1
2-oxo-hepta-3-ene-1,7-dioic acid hydrataseAVR91_0204690Not AvailablePositive1002739 - 100352428285.7
2-dehydro-3-deoxyglucarate aldolaseAVR91_0204695Not AvailablePositive1003509 - 100427626683.9
squalene cyclaseAVR91_0204700Not AvailablePositive1004287 - 100522534822.4
hnh endonucleaseAVR91_0204705Not AvailableNegative1005588 - 100684145774.9
mfs transporterAVR91_0204710Not AvailableNegative1006994 - 100833745805.1
hypothetical proteinAVR91_0204715Not AvailablePositive1008482 - 100903619804.2
hypothetical proteinAVR91_0204720Not AvailableNegative1009014 - 100941815347.1

Displaying genes 961 – 970 of 8294 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.