Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 is a notable species within the genus Amycolatopsis, characterized by its potential for keratin degradation. A key trait of this strain is the presence of flagella, which may contribute to its motility and ecological adaptability in various environments. The strain possesses a single replicon, indicating a streamlined genetic architecture that may facilitate efficient replication and adaptation. Its genetic information is accessible under the accession number LQMT00000000.2, which serves as a reference for researchers studying its genomic characteristics and metabolic capabilities. The ability of Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 to degrade keratin suggests its ecological role in nutrient cycling, particularly in environments rich in keratinous materials such as feathers, hair, and hooves. By breaking down these complex substrates, this strain can contribute to the decomposition process and aid in the recycling of nitrogen and carbon in its habitat. Overall, the combination of motility, genetic simplicity, and keratin degradation capabilities positions Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 as an important organism in microbial ecology and bioremediation efforts involving keratin-rich waste.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis keratiniphila
Strainsubsp. keratiniphila strain DSM 44409

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409

Gene Summary

Adenine Count

1406105 bp

Thymine Count

1409230 bp

Guanine Count

3130028 bp

Cytosine Count

3135989 bp

Genome Length

9091838 bp

Protein-coding Genes

8217 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcription elongation factor greaAVR91_0239415Not AvailableNegative8441674 - 844217418378.3
hypothetical proteinAVR91_0239420Not AvailableNegative8442374 - 844282916319.4
mycothiol conjugate amidase mcaAVR91_0239425Not AvailablePositive8442976 - 844386933298.1
hypothetical proteinAVR91_0239430Not AvailablePositive8443870 - 844419911407.6
polynucleotide kinase-phosphataseAVR91_0239435Not AvailableNegative8444272 - 844676491091.5
3' terminal rna ribose 2'-o-methyltransferase hen1AVR91_0239440Not AvailableNegative8446761 - 844812850449.0
n-acylglucosamine 2-epimeraseAVR91_0239445Not AvailablePositive8448192 - 845021071978.5
hypothetical proteinAVR91_0239450Not AvailableNegative8450191 - 845065815637.9
hypothetical proteinAVR91_0239455Not AvailablePositive8450814 - 845137420666.1
endopolygalacturonaseAVR91_0239460Not AvailablePositive8451444 - 845279948291.4

Displaying genes 7741 – 7750 of 8294 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.