Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 is a notable species within the genus Amycolatopsis, characterized by its potential for keratin degradation. A key trait of this strain is the presence of flagella, which may contribute to its motility and ecological adaptability in various environments. The strain possesses a single replicon, indicating a streamlined genetic architecture that may facilitate efficient replication and adaptation. Its genetic information is accessible under the accession number LQMT00000000.2, which serves as a reference for researchers studying its genomic characteristics and metabolic capabilities. The ability of Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 to degrade keratin suggests its ecological role in nutrient cycling, particularly in environments rich in keratinous materials such as feathers, hair, and hooves. By breaking down these complex substrates, this strain can contribute to the decomposition process and aid in the recycling of nitrogen and carbon in its habitat. Overall, the combination of motility, genetic simplicity, and keratin degradation capabilities positions Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 as an important organism in microbial ecology and bioremediation efforts involving keratin-rich waste.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis keratiniphila
Strainsubsp. keratiniphila strain DSM 44409

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409

Gene Summary

Adenine Count

1406105 bp

Thymine Count

1409230 bp

Guanine Count

3130028 bp

Cytosine Count

3135989 bp

Genome Length

9091838 bp

Protein-coding Genes

8217 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase m24 family proteinAVR91_0230665Not AvailableNegative6519154 - 652024538612.9
hypothetical proteinAVR91_0230670Not AvailablePositive6520783 - 652119013582.6
beta-xylosidaseAVR91_0230675Not AvailableNegative6521145 - 652262951166.0
gnat family n-acetyltransferaseAVR91_0230680Not AvailableNegative6522690 - 652361633472.5
type ii 3-dehydroquinate dehydrataseAVR91_0230685Not AvailableNegative6523613 - 652404415347.3
3-dehydroquinate synthaseAVR91_0230690Not AvailableNegative6524041 - 652515038932.1
hypothetical proteinAVR91_0230695Not AvailableNegative6525159 - 652556013797.6
shikimate kinaseAVR91_0230700Not AvailableNegative6525557 - 652608418185.8
chorismate synthaseAVR91_0230705Not AvailableNegative6526078 - 652726541691.9
prepilin peptidaseAVR91_0230710Not AvailableNegative6527313 - 652792420012.9

Displaying genes 6061 – 6070 of 8294 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.