Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 is a notable species within the genus Amycolatopsis, characterized by its potential for keratin degradation. A key trait of this strain is the presence of flagella, which may contribute to its motility and ecological adaptability in various environments. The strain possesses a single replicon, indicating a streamlined genetic architecture that may facilitate efficient replication and adaptation. Its genetic information is accessible under the accession number LQMT00000000.2, which serves as a reference for researchers studying its genomic characteristics and metabolic capabilities. The ability of Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 to degrade keratin suggests its ecological role in nutrient cycling, particularly in environments rich in keratinous materials such as feathers, hair, and hooves. By breaking down these complex substrates, this strain can contribute to the decomposition process and aid in the recycling of nitrogen and carbon in its habitat. Overall, the combination of motility, genetic simplicity, and keratin degradation capabilities positions Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 as an important organism in microbial ecology and bioremediation efforts involving keratin-rich waste.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis keratiniphila
Strainsubsp. keratiniphila strain DSM 44409

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409

Gene Summary

Adenine Count

1406105 bp

Thymine Count

1409230 bp

Guanine Count

3130028 bp

Cytosine Count

3135989 bp

Genome Length

9091838 bp

Protein-coding Genes

8217 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate starvation-inducible protein phohAVR91_0225565Not AvailableNegative5414530 - 541561539164.0
histidine triad nucleotide-binding proteinAVR91_0225570Not AvailableNegative5415730 - 541608012620.9
16s rrna (uracil(1498)-n(3))-methyltransferaseAVR91_0225575Not AvailableNegative5416767 - 541751926427.6
molecular chaperone dnajAVR91_0225580Not AvailableNegative5417523 - 541868640726.2
heat-inducible transcriptional repressor hrcaAVR91_0225585Not AvailableNegative5418729 - 541975437020.6
hypothetical proteinAVR91_0225590Not AvailableNegative5419836 - 542044121664.3
lipaseAVR91_0225595Not AvailablePositive5420598 - 542185743762.1
methylmalonate-semialdehyde dehydrogenase (acylating)AVR91_0225600Not AvailableNegative5421960 - 542345652669.3
cdar family transcriptional regulatorAVR91_0225605Not AvailablePositive5423600 - 542522257052.6
proteaseAVR91_0225610Not AvailablePositive5425282 - 542564712804.0

Displaying genes 5061 – 5070 of 8294 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.