Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 is a notable species within the genus Amycolatopsis, characterized by its potential for keratin degradation. A key trait of this strain is the presence of flagella, which may contribute to its motility and ecological adaptability in various environments. The strain possesses a single replicon, indicating a streamlined genetic architecture that may facilitate efficient replication and adaptation. Its genetic information is accessible under the accession number LQMT00000000.2, which serves as a reference for researchers studying its genomic characteristics and metabolic capabilities. The ability of Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 to degrade keratin suggests its ecological role in nutrient cycling, particularly in environments rich in keratinous materials such as feathers, hair, and hooves. By breaking down these complex substrates, this strain can contribute to the decomposition process and aid in the recycling of nitrogen and carbon in its habitat. Overall, the combination of motility, genetic simplicity, and keratin degradation capabilities positions Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409 as an important organism in microbial ecology and bioremediation efforts involving keratin-rich waste.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis keratiniphila
Strainsubsp. keratiniphila strain DSM 44409

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis keratiniphila subsp. keratiniphila strain DSM 44409

Gene Summary

Adenine Count

1406105 bp

Thymine Count

1409230 bp

Guanine Count

3130028 bp

Cytosine Count

3135989 bp

Genome Length

9091838 bp

Protein-coding Genes

8217 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
esx-1 secretion-associated proteinAVR91_0212500Not AvailablePositive2750891 - 275121410921.8
rhs proteinAVR91_0212505Not AvailablePositive2751211 - 275226937096.9
hypothetical proteinAVR91_0212510Not AvailablePositive2752352 - 275284018182.8
cell division/cell wall cluster transcriptional repressor mrazAVR91_0212515Not AvailablePositive2753459 - 275389016122.2
16s rrna (cytosine(1402)-n(4))-methyltransferaseAVR91_0212520Not AvailablePositive2754094 - 275505335057.1
hypothetical proteinAVR91_0212525Not AvailablePositive2755050 - 275575724879.3
cell division protein ftsiAVR91_0212530Not AvailablePositive2755757 - 275768568805.9
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseAVR91_0212535Not AvailablePositive2758219 - 275972451818.8
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseAVR91_0212540Not AvailablePositive2759721 - 276124152000.9
phospho-n-acetylmuramoyl-pentapeptide- transferaseAVR91_0212545Not AvailablePositive2761238 - 276232338290.6

Displaying genes 2481 – 2490 of 8294 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.