Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Thiomicrospira
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Thiomicrospira |
| Species | Thiomicrospira sp. XS5 |
| Strain | ZB100022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | star/dumbbell/pleomorphic |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
660024 bp
Thymine Count
653129 bp
Guanine Count
660831 bp
Cytosine Count
658842 bp
Genome Length
2632826 bp
Protein-coding Genes
2353 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AVO42_00060 | Not Available | Positive | 13629 - 13985 | 13247.2 |
| atpase p | AVO42_00070 | Not Available | Negative | 14369 - 16864 | 91047.9 |
| nitrogen fixation protein fixh | AVO42_00075 | Not Available | Negative | 16877 - 17416 | 20322.4 |
| 4fe-4s ferredoxin | AVO42_00080 | Not Available | Negative | 17512 - 18981 | 54890.1 |
| cytochrome c oxidase subunit iii | AVO42_00085 | Not Available | Negative | 19333 - 20232 | 33195.4 |
| cytochrome oxidase subunit ii | AVO42_00090 | Not Available | Negative | 20433 - 21263 | 31902.8 |
| cytochrome oxidase | AVO42_00095 | Not Available | Negative | 21338 - 22768 | 53257.7 |
| imidazoleglycerol-phosphate dehydratase | AVO42_00100 | Not Available | Positive | 23172 - 23759 | 21375.4 |
| imidazole glycerol phosphate synthase subunit hish | AVO42_00105 | Not Available | Positive | 23764 - 24405 | 23571.0 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | AVO42_00110 | Not Available | Positive | 24457 - 25197 | 26314.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
