Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Thiomicrospira
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Thiomicrospira |
| Species | Thiomicrospira sp. XS5 |
| Strain | ZB100022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | star/dumbbell/pleomorphic |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
660024 bp
Thymine Count
653129 bp
Guanine Count
660831 bp
Cytosine Count
658842 bp
Genome Length
2632826 bp
Protein-coding Genes
2353 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate phosphoribosyltransferase | AVO42_03280 | Not Available | Positive | 716599 - 717621 | 36317.3 |
| indole-3-glycerol-phosphate synthase | AVO42_03285 | Not Available | Positive | 717748 - 718551 | 29715.0 |
| s-adenosylmethionine decarboxylase | AVO42_03290 | Not Available | Positive | 718856 - 719350 | 18211.3 |
| spermidine synthase | AVO42_03295 | Not Available | Positive | 719343 - 720200 | 31431.2 |
| ornithine decarboxylase | AVO42_03300 | Not Available | Positive | 720337 - 721458 | 41016.2 |
| peroxiredoxin | AVO42_03305 | Not Available | Positive | 721476 - 721892 | 15069.2 |
| peptidase m42 | AVO42_03310 | Not Available | Negative | 721970 - 723025 | 39559.7 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | AVO42_03315 | Not Available | Negative | 723151 - 724458 | 47810.4 |
| pseudouridylate synthase | AVO42_03320 | Not Available | Negative | 724590 - 725348 | 29279.8 |
| hypothetical protein | AVO42_03325 | Not Available | Positive | 725465 - 725968 | 17706.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
