Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Thiomicrospira
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Thiomicrospira |
| Species | Thiomicrospira sp. XS5 |
| Strain | ZB100022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | star/dumbbell/pleomorphic |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
660024 bp
Thymine Count
653129 bp
Guanine Count
660831 bp
Cytosine Count
658842 bp
Genome Length
2632826 bp
Protein-coding Genes
2353 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dehydratase | AVO42_03180 | Not Available | Positive | 693259 - 694230 | 35282.9 |
| 2', 3'-cyclic nucleotide 2'-phosphodiesterase | AVO42_03185 | Not Available | Positive | 694319 - 695572 | 46025.0 |
| cation-efflux pump fief | AVO42_03190 | Not Available | Positive | 695677 - 696579 | 33575.8 |
| glutamate synthase | AVO42_03195 | Not Available | Negative | 696634 - 697191 | 20312.7 |
| secretion protein hlyd | AVO42_03200 | Not Available | Positive | 697446 - 698690 | 44803.6 |
| acriflavin resistance protein | AVO42_03205 | Not Available | Positive | 698691 - 701864 | 116373.0 |
| hypothetical protein | AVO42_03210 | Not Available | Negative | 701891 - 702331 | 16251.3 |
| transketolase | AVO42_03215 | Not Available | Positive | 702704 - 704692 | 72831.4 |
| glyceraldehyde-3-phosphate dehydrogenase | AVO42_03220 | Not Available | Positive | 704763 - 705764 | 35776.6 |
| phosphoglycerate kinase | AVO42_03225 | Not Available | Positive | 705928 - 707109 | 40799.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
