Sinorhizobium glycinis strain CCBAU 23380

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium glycinis strain CCBAU 23380 is a notable bacterium characterized by the presence of flagella, which facilitates its motility. This trait is essential for its environmental adaptability and colonization capabilities within its ecological niche. The strain is defined by a single replicon, indicating a streamlined genomic organization that may contribute to its efficiency in resource utilization and growth within specific environments. The genomic information for Sinorhizobium glycinis strain CCBAU 23380 is available under the accession number LPUX00000000.1, providing a reference for researchers interested in studying its genetic makeup and functional traits. This genetic data can assist in understanding the strain's potential role in nitrogen fixation, a critical process for soil fertility and plant growth, particularly in agricultural systems. The ecological insight drawn from the characteristics of Sinorhizobium glycinis strain CCBAU 23380 highlights its significance in symbiotic relationships with leguminous plants. By possessing flagella, the strain is likely to navigate the soil environment effectively, facilitating its interaction with plant roots. This interaction is crucial for the establishment of root nodules, where nitrogen fixation occurs, ultimately contributing to improved soil health and agricultural productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium glycinis
Strainstrain CCBAU 23380

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium glycinis strain CCBAU 23380
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium glycinis strain CCBAU 23380 scaffold9, whole genome

Gene Summary

Adenine Count

1138794 bp

Thymine Count

1130754 bp

Guanine Count

1885773 bp

Cytosine Count

1883962 bp

Genome Length

6039294 bp

Protein-coding Genes

5327 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetylmuramoyl-l-alanine amidaseAU381_22670Not AvailablePositive3689218 - 368998228321.3
lytic transglycosylaseAU381_22675Not AvailablePositive3690209 - 369074218718.7
fad-dependent oxidoreductaseAU381_22680Not AvailablePositive3690922 - 369210942244.8
cell division protein mrazAU381_22685Not AvailablePositive3692966 - 369340616277.3
ribosomal rna small subunit methyltransferase hAU381_22690Not AvailablePositive3693421 - 369444636075.3
hypothetical proteinAU381_22695Not AvailablePositive3694453 - 369485414509.6
cell division proteinAU381_22700Not AvailablePositive3694854 - 369660262369.1
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseAU381_22705Not AvailablePositive3696670 - 369813050847.5
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligaseAU381_22710Not AvailablePositive3698132 - 369956549538.9
phospho-n-acetylmuramoyl-pentapeptide- transferaseAU381_22715Not AvailablePositive3699705 - 370080539242.1

Displaying genes 3311 – 3320 of 5380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.