Burkholderia ubonensis strain MSMB1608WGS

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia ubonensis strain MSMB1608WGS is characterized by having a single replicon, indicating its genetic material is contained within one chromosome. The strain has been assigned the accession number LPGK00000000.1, which provides a unique identifier for its genomic data in biological databases. Burkholderia ubonensis is part of the Burkholderia genus, known for its ecological versatility and ability to inhabit a variety of environments. This particular strain may contribute to our understanding of the diversity within the Burkholderia species, which are often studied for their roles in bioremediation, plant growth promotion, and pathogenicity in some cases. The single-replicon structure of MSMB1608WGS may suggest a streamlined genomic organization that can be advantageous for survival in specific ecological niches. This trait could influence its metabolic capabilities and adaptability to environmental stressors. The genomic insights provided by the accession number can facilitate further research into the strain's functional genomics, potentially revealing its ecological roles and interactions within microbial communities. Understanding such strains can enhance our knowledge of microbial diversity and the functional potential of environmental microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia ubonensis
Strainstrain MSMB1608WGS

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia ubonensis strain MSMB1608WGS MSMB1608WGS_99, whole

Gene Summary

Adenine Count

1350729 bp

Thymine Count

1343969 bp

Guanine Count

2714314 bp

Cytosine Count

2716929 bp

Genome Length

8125941 bp

Protein-coding Genes

6989 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-1WL19_16870Not AvailableNegative8097449 - 809771510001.0
cold-shock proteinWL19_16875Not AvailableNegative8098225 - 80984287380.71
4-hydroxyphenylpyruvate dioxygenaseWL19_16880Not AvailableNegative8099256 - 810038341557.3
shikimate transporterWL19_16885Not AvailablePositive8100734 - 810204146614.8
udp-n-acetylglucosamine 1-carboxyvinyltransferaseWL19_16890Not AvailablePositive8102230 - 810353147237.0
4-hydroxyphenylpyruvate dioxygenaseWL19_16895Not AvailablePositive8103557 - 810432728221.1
atp-dependent dna helicaseWL19_16900Not AvailableNegative8104340 - 810664084028.0
nucleaseWL19_16905Not AvailableNegative8106637 - 810835863687.9
hypothetical proteinWL19_16910Not AvailablePositive8108567 - 810892913610.8
structural protein mipaWL19_16915Not AvailableNegative8108996 - 810987431672.7

Displaying genes 6971 – 6980 of 6989 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.