Haloferax marisrubri strain SB3

RodMotileaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Haloferax

Description

Haloferax marisrubri strain SB3 is a halophilic archaeon isolated from the Red Sea. This organism exhibits a rod shape and is characterized as Gram-negative. It is aerobic, requiring oxygen for its metabolic processes. H. marisrubri strain SB3 is motile, possessing flagella that facilitate its movement in its saline environment. The optimal growth temperature for this strain is 37 degrees Celsius, which suggests a preference for warm aquatic habitats typical of its natural setting in the Red Sea. This strain is notable for having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in extreme conditions. The accession number for H. marisrubri strain SB3 is LOPW00000000.2, which provides a reference for genetic and genomic studies. The presence of H. marisrubri strain SB3 in the Red Sea highlights the diverse microbial life that thrives in extreme saline environments. Its adaptations, such as aerobic metabolism and motility, suggest ecological roles in nutrient cycling and interactions with other microbial communities in hyper-saline waters. Understanding such organisms is crucial for insights into microbial diversity and the potential applications of extremophiles in biotechnology and environmental management.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHaloferax
SpeciesHaloferax marisrubri
Strainstrain SB3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Haloferax marisrubri strain SB3
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangeNot Available
HabitatRed Sea
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Haloferax marisrubri strain SB3


Gene Summary

Adenine Count

669872 bp

Thymine Count

670135 bp

Guanine Count

1280858 bp

Cytosine Count

1280775 bp

Genome Length

3904985 bp

Protein-coding Genes

3741 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAUR65_000395Not AvailablePositive79833 - 800909332.03
hypothetical proteinAUR65_000400Not AvailablePositive80104 - 8082627674.1
s9 family peptidaseAUR65_000405P34422Positive80866 - 8269267520.5
methylmalonyl-coa mutaseAUR65_000410I3VE74Positive82751 - 8317014906.7
methylmalonyl co-a mutase-associated gtpase meabAUR65_000415Q9V225Positive83173 - 8428539576.8
alpha/beta hydrolaseAUR65_000420Not AvailablePositive84388 - 8531433421.0
nucleic acid-binding proteinAUR65_000425Not AvailableNegative85514 - 8589413246.4
3-ketoacyl-coa thiolaseAUR65_000430Not AvailableNegative85891 - 8705740175.7
peptidase m28AUR65_000435P25152Positive87259 - 8856646768.0
atp-nad kinaseAUR65_000440Not AvailablePositive88702 - 8943324742.9

Displaying genes 81 – 90 of 3795 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

218 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 218 metabolites

Health Effects

No health effects information available for this bacterium.