Xanthomonas axonopodis pv. melhusii strain LMG9050

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas axonopodis pv. melhusii strain LMG9050 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This strain is known to harbor a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The primary host for X. axonopodis pv. melhusii is Solanum lycopersicum, commonly known as the tomato plant. This bacterium is pathogenic to tomatoes, causing a condition known as bacterial spot. This disease is characterized by the development of lesions on the leaves and stems of tomato plants, which can lead to reduced yield and quality of the fruit. The genetic sequence of this strain is cataloged under the accession number LOJW00000000.1, providing a reference for further research and understanding of its pathogenic mechanisms. Given the economic significance of tomatoes in agriculture, studying X. axonopodis pv. melhusii strain LMG9050 is crucial for developing management strategies to mitigate the impact of bacterial spot on tomato crops. In summary, the rod-shaped Xanthomonas axonopodis pv. melhusii strain LMG9050 is a flagellated bacterium that poses a threat to tomato cultivation by causing bacterial spot disease. Its specific host interaction highlights the need for targeted agricultural practices to reduce the detrimental effects of this pathogen on crop health and productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas axonopodis
Strainpv. melhusii strain LMG9050

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas axonopodis pv. melhusii strain LMG9050
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum lycopersicum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas axonopodis pv. melhusii strain LMG9050 contig_99,

Gene Summary

Adenine Count

895293 bp

Thymine Count

895863 bp

Guanine Count

1640738 bp

Cytosine Count

1648945 bp

Genome Length

5080839 bp

Protein-coding Genes

4050 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gnat family acetyltransferaseXmlh_16990Not AvailableNegative3626842 - 362730016583.0
argininosuccinate synthaseXmlh_16995Not AvailableNegative3627547 - 362878244772.2
acetylornithine carbamoyltransferaseXmlh_17000Not AvailableNegative3628836 - 362986738292.8
hypothetical proteinXmlh_17005Not AvailableNegative3630181 - 363067518517.2
cysteine--trna ligaseXmlh_17010Not AvailablePositive3630853 - 363227751515.0
fe-s cluster assembly protein sufeXmlh_17015Not AvailablePositive3632440 - 363287716146.1
multidrug transporterXmlh_17020Not AvailablePositive3632874 - 363412443555.6
molecular chaperone dnakXmlh_17025Not AvailableNegative3634332 - 363483219315.5
hypothetical proteinXmlh_17030Not AvailablePositive3634879 - 363547218533.8
membrane protein insertion efficiency factor yiddXmlh_17035Not AvailablePositive3635472 - 363576510587.0

Displaying genes 3011 – 3020 of 4165 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial spot of tomatoCausesPMC6946519

Displaying health effects 1 – 1 of 1 in total