Pseudomonas caspiana strain FBF102

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas caspiana strain FBF102 is an aerobic bacterium characterized by its single replicon structure. This strain is cataloged under the accession number LOHF00000000.1, which is critical for its identification and classification within microbial databases. The aerobic nature of Pseudomonas caspiana indicates its reliance on oxygen for growth and metabolic processes, positioning it within a group of bacteria known for their versatility in various ecological niches. Aerobic bacteria, like Pseudomonas caspiana, play significant roles in environmental processes, including nutrient cycling and the degradation of organic compounds. Their ability to thrive in oxygen-rich environments highlights their potential for bioremediation applications, where they can be employed to clean up pollutants in soil and water. Understanding the genetic makeup and metabolic capabilities of strains like FBF102 is essential for harnessing their ecological functions and potential biotechnological applications. The single replicon structure may also suggest a streamlined genome organization, which could facilitate adaptability to different environments. Therefore, Pseudomonas caspiana strain FBF102 stands as an important candidate for further research in microbial ecology and applied microbiology, particularly in studies focused on aerobic processes and bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas caspiana
Strainstrain FBF102

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas caspiana strain FBF102
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas caspiana strain FBF102 scaffold00049, whole genome

Gene Summary

Adenine Count

1296167 bp

Thymine Count

1309731 bp

Guanine Count

1730622 bp

Cytosine Count

1717215 bp

Genome Length

6103762 bp

Protein-coding Genes

5172 genes

Non-Coding Genes

176 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s20AUC60_21700Not AvailableNegative4896123 - 489640110072.3
murein biosynthesis protein murjAUC60_21705Not AvailablePositive4896654 - 489819256107.9
bifunctional riboflavin kinase/fmn adenylyltransferaseAUC60_21710Not AvailablePositive4898325 - 489926334191.2
isoleucine--trna ligaseAUC60_21715Not AvailablePositive4899273 - 4902104105550.0
signal peptidase iiAUC60_21720Not AvailablePositive4902097 - 490260018759.0
peptidylprolyl isomeraseAUC60_21725Not AvailablePositive4902593 - 490304516551.6
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseAUC60_21730Not AvailablePositive4903108 - 490405534484.0
hypothetical proteinAUC60_21735Not AvailableNegative4904229 - 490472618134.1
general secretion pathway protein gsphAUC60_21740Not AvailablePositive4904858 - 490533716447.8
type iv pilus modification protein pilvAUC60_21745Not AvailablePositive4905330 - 490586318142.6

Displaying genes 4351 – 4360 of 5348 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.