Janthinobacterium psychrotolerans strain S3-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Janthinobacterium

Description

Janthinobacterium psychrotolerans strain S3-2 is a Gram-negative bacterium characterized by the presence of flagella, which suggests it has the ability to move in various environments. This strain has a single replicon, indicating a relatively simple genetic structure, which may influence its adaptability and evolutionary potential. The genomic data for this strain is available under the accession LOCQ00000000.1. The classification of Janthinobacterium psychrotolerans places it within a group of psychrotolerant bacteria, which are known to thrive in cold environments. This trait is particularly significant, as organisms like J. psychrotolerans contribute to the biogeochemical processes in polar and alpine ecosystems. Their capacity to survive and function at low temperatures may play a role in nutrient cycling and the degradation of organic matter in these habitats. Furthermore, the flagella may enhance the bacterium's ecological niche by facilitating movement toward favorable conditions or resources, thereby influencing its survival and interactions with other microbial communities in cold environments. Understanding the characteristics of J. psychrotolerans strain S3-2 can provide insights into the ecological dynamics of cold habitats and the roles that psychrotolerant bacteria play in maintaining ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusJanthinobacterium
SpeciesJanthinobacterium psychrotolerans
Strainstrain S3-2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Janthinobacterium psychrotolerans strain S3-2 Ga0101933_1001,

Gene Summary

Adenine Count

1079355 bp

Thymine Count

1080812 bp

Guanine Count

1834989 bp

Cytosine Count

1848906 bp

Genome Length

5844062 bp

Protein-coding Genes

5182 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-glcnac3naca epimeraseASR47_101569Not AvailableNegative1577600 - 157846931389.8
udp-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferaseASR47_101570Not AvailableNegative1578681 - 157978139840.1
udp-2-acetamido-3-amino-2,3-dideoxy-glucuronate n-acetyltransferaseASR47_101571Not AvailableNegative1579778 - 158036220660.4
udp-n-acetyl-2-amino-2-deoxyglucuronate dehydrogenaseASR47_101572Not AvailableNegative1580376 - 158143439389.0
udp-n-acetyl-d-galactosamine dehydrogenaseASR47_101573Not AvailableNegative1581448 - 158274347379.2
capsule polysaccharide export protein kpse/rkprASR47_101574Not AvailableNegative1582912 - 158410843442.8
protein involved in polysaccharide exportASR47_101575Not AvailableNegative1584145 - 158608870034.7
ndp-sugar epimeraseASR47_101576Not AvailableNegative1586804 - 158878072101.6
putative membrane protein yeaq/ymge, transglycosylase-associated protein familyASR47_101577Not AvailablePositive1589333 - 15896029551.22
peptidase s46ASR47_101578Not AvailablePositive1589914 - 159206778575.2

Displaying genes 1401 – 1410 of 5182 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.