Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis regifaucium |
| Strain | strain GY080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis regifaucium strain GY080 contig_9, whole genome
Gene Summary
Adenine Count
1297563 bp
Thymine Count
1308061 bp
Guanine Count
2831240 bp
Cytosine Count
2836058 bp
Genome Length
8273016 bp
Protein-coding Genes
7375 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent protein deacetylase of sir2 family | AVL48_21020 | Not Available | Positive | 885538 - 886308 | 28120.8 |
| geosmin synthase | AVL48_21025 | Not Available | Positive | 886413 - 888653 | 84251.9 |
| sugar hydrolase | AVL48_21030 | Not Available | Negative | 888917 - 890104 | 42310.0 |
| rna polymerase subunit sigma | AVL48_21035 | Not Available | Positive | 890406 - 891032 | 22625.1 |
| lysr family transcriptional regulator | AVL48_21040 | Not Available | Positive | 891304 - 892218 | 33284.7 |
| rrna methyltransferase | AVL48_21045 | Not Available | Negative | 892200 - 893192 | 35260.1 |
| dehydrogenase | AVL48_21050 | Not Available | Positive | 893343 - 893756 | 15263.1 |
| rna polymerase subunit sigma-24 | AVL48_21055 | Not Available | Positive | 893949 - 895232 | 46482.8 |
| rna polymerase subunit sigma-70 | AVL48_21060 | Not Available | Negative | 895288 - 895683 | 14096.1 |
| nuclease | AVL48_21065 | Not Available | Negative | 895818 - 896690 | 31796.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
