Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis regifaucium |
| Strain | strain GY080 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis regifaucium strain GY080 contig_9, whole genome
Gene Summary
Adenine Count
1297563 bp
Thymine Count
1308061 bp
Guanine Count
2831240 bp
Cytosine Count
2836058 bp
Genome Length
8273016 bp
Protein-coding Genes
7375 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | AVL48_11955 | Not Available | Negative | 6756798 - 6757238 | 14090.7 |
| hypothetical protein | AVL48_11960 | Not Available | Positive | 6757370 - 6757738 | 13337.5 |
| rna polymerase subunit sigma | AVL48_11965 | Not Available | Positive | 6757762 - 6758247 | 17887.2 |
| anti-sigma factor | AVL48_11970 | Not Available | Positive | 6758244 - 6758867 | 21394.7 |
| peptidase a24 | AVL48_11975 | Not Available | Positive | 6759249 - 6759860 | 19800.6 |
| chorismate synthase | AVL48_11980 | Not Available | Positive | 6759907 - 6761094 | 41626.7 |
| shikimate kinase | AVL48_11985 | Not Available | Positive | 6761106 - 6761615 | 17413.7 |
| hypothetical protein | AVL48_11990 | Not Available | Positive | 6761612 - 6762040 | 14514.2 |
| 3-dehydroquinate synthase | AVL48_11995 | Not Available | Positive | 6762049 - 6763158 | 38843.0 |
| 3-dehydroquinate dehydratase | AVL48_12000 | Not Available | Positive | 6763155 - 6763586 | 15374.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
